PubMed-Search
AI-powered tool for searching and analyzing PubMed biomedical literature
Why use this skill?
Efficiently search, analyze, and retrieve PubMed biomedical literature. Automate research with our AI-powered PubMed-Search tool for fast metadata extraction and article summarization.
Install via CLI (Recommended)
clawhub install openclaw/skills/skills/jackkuo666/pubmed-search-skillWhat This Skill Does
The PubMed-Search skill is a specialized biomedical research assistant designed to bridge the gap between complex medical databases and AI-driven analysis. It enables users to perform granular literature searches, extract detailed metadata via PMIDs, and obtain summarized insights on research background, methodologies, and findings. Whether you are a student, researcher, or clinician, this tool streamlines the process of finding peer-reviewed content and accessing available full-text PDF documents through PubMed Central.
Installation
Installation is straightforward and accommodates various development environments. First, ensure you have Python 3.8 or higher installed. You can install dependencies using the recommended 'uv' package manager for maximum speed, 'conda' for isolated scientific workflows, or standard 'pip'. Once dependencies are installed, navigate to the skill directory, copy '.env.example' to '.env', and configure any optional API credentials. Verification is achieved by running python pubmed_search.py --help to confirm the interface is correctly configured.
Use Cases
This skill is perfect for literature reviews, quick fact-checking of medical claims, and staying updated with the latest breakthroughs in clinical journals. It is particularly useful for extracting key methodologies from complex papers to understand if a specific study is applicable to your current project. Researchers can automate the collection of large batches of metadata, reducing the hours typically spent on manual bibliographic sorting.
Example Prompts
- "Find me the most cited research papers from 2022 on the efficacy of mRNA vaccines in pediatric populations."
- "Search for recent studies by author 'Jennifer Doudna' regarding CRISPR therapeutic applications and summarize the primary limitations found in the methodology."
- "Can you check if there are full-text articles available for PMID 35489721 and provide a bulleted list of the key findings?"
Tips & Limitations
For optimal results, utilize the advanced search filters to narrow down by specific journals or publication years. Please note that while the tool can attempt to download full-text PDFs, access is restricted to open-access articles via PubMed Central. If an article is behind a paywall, the tool will provide the direct URL for personal access. Always verify medical information with professional consultation, as AI-assisted summarization may omit nuances contained within the full article text.
Metadata
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Find the right skillPaste this into your clawhub.json to enable this plugin.
{
"plugins": {
"official-jackkuo666-pubmed-search-skill": {
"enabled": true,
"auto_update": true
}
}
}Tags(AI)
Flags: network-access, file-read, external-api
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